Chapter 1: Comprehending Development: Generating New Cells and Organs

Where possible, references have been linked to PubMed, the National Center for Biotechnology Information’s online database of journal article citations. Citations that do not include links to PubMed are either referring to papers that are too old to be included in PubMed, or to books, which are not listed on PubMed.

Aristotle. ca. 350 b.c.e. Metaphysics. Book 1, Part 2. D. Ross (trans.). Oxford University Press, New York, 1979.

Aristotle. ca. 350 b.c.e. The Generation of Animals. A. L. Peck (trans.); G. P. Goold (ed.). Harvard University Press, Cambridge, MA, 1990.

Begon, M., J. L. Harper and C. R. Townsend. 1986. Ecology: Individuals, Populations, and Communities. Blackwell Scientific, Oxford.

Bonnet, C. 1764. Contemplation de la Nature. Marc-Michel Ray, Amsterdam.

Cadieu, E. and 19 others. 2009. Coat variation in the domestic dog is governed by variants in three genes. Science 326: 150–153.
PubMed Link

Camp, E., S. Dietrich and A. Münsterberg. 2012. Fate mapping identifies the origin of SHF/AHF progenitors in the chick primitive streak. PLoS One 7(12): e51948.
PubMed Link

Carlson, B. M. 1981. Patten’s Foundations of Embryology. McGraw-Hill, New York.

Cassirer, E. 1950. Developmental mechanics and the problem of cause in biology. In E. Cassirer (ed.), The Problem of Knowledge. Yale University Press, New Haven.

Churchill, A. 1991. The rise of classical descriptive embryology. In S. F. Gilbert (ed.), A Conceptual History of Modern Embryology, Plenum Press, New York, pp. 1–29.

Conklin, E. G. 1905. The organization and cell lineage of the ascidian egg. J. Acad. Nat. Sci. Phila. 13: 1–119.

Cretekos, C. J., S. D. Weatherbee, C. H. Chen, N. K. Badwaik, L. Niswander, R. R. Behringer and J. J. Rasweiler IV. 2005. Embryonic staging system for the short-tailed fruit bat, Carollia perspicillata, a model organism for the mammalian order Chiroptera, based upon timed pregnancies in captive-bred animals. Dev. Dyn. 233: 721–738.
PubMed Link

Cretekos, C. J., Y. Wang, E. D. Green, NISC Comparative Sequencing Program, J. F. Martin, J. S. Rasweiler IV and R. R. Behringer. 2008. Regulatory divergence modifies limb length between mammals. Genes Dev. 22: 141–151.
PubMed Link

Darnell, D. K. and G. C. Schoenwolf. 1997. Modern techniques for labeling in avian and murine embryos. In G. P. Daston (ed.), Molecular and Cellular Methods in Developmental Toxicology. CRC Press, Boca Raton, FL, pp. 231–272.

Darwin, C. 1859. On the Origin of Species by Means of Natural Selection, or the Preservation of Favoured Races in the Struggle for Life. John Murray, London.
Link

Darwin, C. 1874. The Descent of Man, and Selection in Relation to Sex. 2nd Ed. John Murray, London.
Link

Drögemüller, C., S. Rüfenacht, B. Wichert and T. Leeb. 2007. Mutations within the fgf5 gene are associated with hair length in cats. Anim. Genet. 38: 218–121.
PubMed Link

Freem, L. J., J. M. Delalande, A. M. Campbell, N. Thapar and A. J. Burns. 2012. Lack of organ specific commitment of vagal neural crest cell derivatives as shown by back-transplantation of GFP chicken tissues. Int. J. Dev. Biol. 56: 245–254.
PubMed Link

Galis, F. and B. Sinervo. 2002. Divergence and convergence in early embryonic stages of metazoans. Contrib. Zool. 71: 101–113.
Link

Gould, S. J. 1977. Ontogeny and Phylogeny. Belknap Press, Cambridge, MA.

Harvey, W. 1651. Exercitationes de generatione animalium: quibus accedunt quaedum de partu, de membranis ac humoribus uteri et de conceptione. London.

Horner, J. and J. Gorman. 2009. How to Build a Dinosaur. Penguin, New York.

Irie, N. and S. Kuratani. 2011. Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis. Nature Commun. 2: 248.
PubMed Link

Kehler, J. S. and 8 others. 2007. Four independent mutations in the feline fibroblast growth factor 5 gene determine the long-haired phenotype in domestic cats. J. Hered. 98: 555–566.
PubMed Link

Keibel, F. 1904. Normentafeln zur Entwicklungsgeschichte der Wirbeltiere, Heft IV, Gustav Fischer, Jena.

Kölreuter, J. G. 1766. Vorläufige Nachricht von einigen das feschlecht der Planzen betreffenden Versuchen und Beobachtung, nebst Fortsetzungen, 1, 2, 3.

Kowalevsky, A. 1871. Weitere Studien II. Die Entwicklung der einfachen Ascidien. Arch. Micr. Anat. 7: 101–130.

Kozlowski, D. J., T. Muramaki, R. K. Ho and E. S. Weinberg. 1998. Regional cell movement and tissue patterning in the zebrafish embryo revealed by fate mapping with caged fluorescein. Biochem. Cell Biol. 75: 551–562.
PubMed Link

Lane, M. C. and M. D. Sheets. 2006. Heading in a new direction: Implications of the revised fate map for understanding Xenopus laevis development. Dev. Biol. 296: 12–28.
PubMed Link

Larsen, E. and McLaughlin, H. 1987. The morphogenetic alphabet: Lessons for simple-minded genes. BioEssays 7: 130–132.
PubMed Link

Le Douarin, N. M. 1969. Particularités du noyau interphasique chez la Caille japonaise (Coturnix coturnix japonica). Utilisation de ces particularités comme “marquage biologique” dans les recherches sur les interactions tissulaires et les migrations cellulaires au cours de l’ontogenèse. Bull. Biol. Fr. Belg. 103: 435–452.

Le Douarin, N. M. and M.-A. Teillet. 1973. The migration of neural crest cells to the wall of the digestive tract in avian embryo. J. Embryol. Exp. Morphol. 30: 31–48.
PubMed Link

Lenoir, T. 1980. Kant, Blumenbach, and vital materialism in German biology. Isis 71: 77–108.
PubMed Link

Lenz, W. 1962. Thalidomide and congenital abnormalities. Lancet 1: 45 (reported in a symposium in 1961.)

Lenz, W. 1966. Malformations caused by drugs in pregnancy. Am. J. Dis. Child. 112: 99–l06.
PubMed Link

Lillie, F. R. 1908. The Embryology of the Chick. Henry Holt, New York.

Maître-Jan, A. 1722. Observations sur la formation du poluet. L. d’Houdry, Paris.

Malpighi, M. 1672. De Formatione Pulli in Ovo (London). Reprinted in H. B. Adelmannm, Marcello Malpighi and the Evolution of Embryology. Cornell University Press, Ithaca, NY, 1966.

McBride, W. G. 1961. Thalidomide and congenital abnormalities. Lancet 2: 1358.
PubMed Link

Nishida, H. 1987. Cell lineage analysis in ascidian embryos by intracellular injection of a tracer enzyme. III. Up to the tissue-restricted stage. Dev. Biol. 121: 526–541. PubMed Link

Nowack, E. 1965. Die sensible Phase bei der Thalidomide-Embryopathie. Humangenetik 1: 516–536.
PubMed Link

Ota, Y., Y. Saitoh, S. Suzuki, K. Ozawa, M. Kawano and T. Imamura. 2002. Fibroblast growth factor 5 inhibits hair growth by blocking dermal papilla cell activation. Biochem. Biophys. Res. Comm. 290: 169–176.
PubMed Link

Pander, C. 1817. Beiträge zur Entwickelungsgeschichte des Hünchens im Eye. Brönner, Würzburg.

Parker, H. G. and 16 others. 2009. An expressed fgf4 retrogene is associated with breed-defining chondrodysplasia in domestic dogs. Science 325: 995–998.
PubMed Link

Pinto-Correia, C. 1997. The Ovary of Eve. University of Chicago Press, Chicago.

Raje, N. and K. Anderson. 1999. Thalidomide: A revival story. New Engl. J. Med. 341: 1606–1609.
PubMed Link

Rawles, M. E. 1940. The pigment forming potency of early chick blastoderm. Proc. Natl. Acad. Sci. USA 26: 86–94.

Reverberi, G. and A. Minganti. 1946. Fenomeni di evocazione nello sviluppo dell’uovo di Ascidie. Risultati dell’indagine spermentale sull’ouvo di Ascidiella aspersa e di Ascidia malaca allo stadio di 8 blastomeri. Pubbl. Staz. Zool. Napoli 20: 199–252.
PubMed Link

Riechert, K. B. 1837. Ueber die Visceralbogen der Wirbelthiere im Allgemeinen und deren Metamorphosen bei den Vögeln und Säugethieren. In Archiv für Anatomie, Physiologie und wissenschaftliche Medicin 120–222.

Rieppel, O. 2011. Evolutionary Theory and the Creation Controversy. Springer, New York.

Ris, H. 1941. An experimental study of the origins of melanophores in birds. Physiol. Zool. 14: 48–66.

Roca, A. L. and 9 others. 2009. Genetic variation at hair length candidate genes in elephants and the extinct woolly mammoth. BMC Evol. Biol. 9: 232.
PubMed Link

Roe, S. 1981. Matter, Life, and Generation: Eighteenth-Century Embryology and the Haller-Wolff Debate. Cambridge University Press, Cambridge.

Rugh, R. 1950. The Frog: Its Reproduction and Development. McGraw-Hill, New York.

Sears, K. E., R. R. Behringer, J. J. Rasweiler IV and L. A. Niswander. 2006. Development of bat flight: Morphologic and molecular evolution of bat wing digits. Proc. Natl. Acad. Sci. USA 103: 6581–6586.
PubMed Link

Schoenebeck, J. J. and 14 others. 2012. Variation of BMP3 contributes to dog breed skull diversity. PLoS Genet. 8(8):e1002849.
PubMed Link

Thorogood, P. 1997. The relationship between genotype and phenotype: Some basic concepts. In P. Thorogood (ed.), Embryos, Genes, and Birth Defects. Wiley, New York, pp. 1–16.

Toms, D. A. 1962. Thalidomide and congenital abnormalities. Lancet 2: 400.

Veeman, M. T., Y. Nakatani, C. Hendrickson, V. Ericson, C. Lin and W. C. Smith. 2008. Chongmague reveals an essential role for laminin-mediated boundary formation in chordate convergence and extension movements. Development 135: 33–41.
PubMed Link

Vogt, W. 1929. Gestaltungsanalyse am Amphibienkeim mit örtlicher Vitalfärbung. II. Teil Gastrulation und Mesodermbildung bei Urodelen und Anuren. Wilhelm Roux Arch. Entwicklungsmech. Org. 120: 384–706.

von Baer, K. E. 1828. Entwicklungsgeschichte der Thiere: Beobachtung und Reflexion. Bornträger, Konigsberg.

Weatherbee, S. D., R. R. Behringer, J. J. Rasweiler IV and L. A. Niswander. 2006. Interdigital webbing retention in bat wings illustrates genetic changes underlying amniote limb diversification. Proc. Natl. Acad. Sci. USA 103: 15103–15107.
PubMed Link

Weismann, A. 1875. Über den Saison-Dimorphismus der Schmetterlinge. In Studien zur Descendenz-Theorie. Engelmann, Leipzig.

Winsor, M. P. 1969. Barnacle larvae in the nineteenth century: A case study in taxonomic theory. J. Hist. Med. Allied Sci. 24: 294–309.
PubMed Link

Winter, R. M. 1996. Analysing human developmental abnormalities. BioEssays 18: 965–971.
PubMed Link

Wolff, K. F. 1767. De formatione intestinorum praecipue. Novi Commentarii Academine Scientarum Imperialis Petropolitanae 12: 403–507.

Woo, K. and S. E. Fraser. 1995. Order and coherence in the fate map of the zebrafish embryo. Development 121: 2595–2609.
PubMed Link

Zangerl, R. and M. E. Williams. 1975. New evidence on the nature of the jaw suspension in Paleozoic anacanthus sharks. Paleontology 18: 333–341.

 

Citation for the BioWeb Conference Links
Barresi, M. J., and Lee, K. 2005–2010. Biology Web Conferences. Smith College, Northampton, MA.

© All the material on this website is protected by copyright. It may not be reproduced in any form without permission from the copyright holder.
Home Link